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Computational Biology

A Practical Introduction to BioData Processing and Analysis with Linux, MySQL, and R

Erschienen am 31.01.2013, 2. Auflage 2013
117,69 €
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Bibliografische Daten
ISBN/EAN: 9783642347481
Sprache: Englisch
Umfang: xxix, 449 S., 12 s/w Illustr., 66 farbige Illustr.
Format (T/L/B): 3 x 24.1 x 16.1 cm
Einband: gebundenes Buch

Beschreibung

InhaltsangabePart I Whetting Your Appetite.- 1 Introduction.- 2 Content of this Book.- Part II Computer & Operating Systems.- 3 Unix/Linux.- Part III Working with Linux.- 4 The First Touch.- 5 Working with Files.- 6 Remote Connections.- 7 Playing.- 8 Using the Shell.- 9 Installing BLAST+ and ClustalW.- 10 Shell Programming.- 11 Regular Expressions.- 12 Sed.- Part IV Programming.- 13 AWK.- 14 Perl.- 15 Other Programming Languages.- Part V Advanced Data Analysis.- 16 Relational Databases with MySQL.- 17 The Statistics Suite R.- Part VI Worked Examples.- 18 Genomic Analysis of the Pathogenicity Factors from E. coli Strain O157:H7 and EHEC Strain O104:H4.- 19 Limits of BLAST & Homology Modeling.- 20 Virtual Sequencing of pUC18c.- 21 Querying for Potential Redox-Regulated Enzymes.- Part VII Additional Material.- References.- A Supplementary Information.- Solutions.- Index.

Autorenportrait

Röbbe Wünschiers is Professor for Biochemistry/Molecular Biology at University of Applied Sciences Mittweida/Germany, where is teaching courses on biotechnology and bioinformatics. In 2004 he published the textbook "Computational Biology - Unix/Linux, Data Processing and Programming" with Springer. The new edition of this book will benefit from several years of teaching experience at different Universities, and his experience gathered while leading a bioinformatics team at BASF Plant Science, Germany.